Forum "ORF finding"

Thread subject: orf

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orf
kiran
21 Dec 2009 18:50
Non evaluated contribution
>GOS_1138010 Genomic DNA (Sargasso Sea: Sargasso Sea, Station 11)
TTATTACAACAAACCAACTCAAAAAGGACTAATAAATCATTACACAAAACTTGCAAATGAGGTCGATATACCACAAATTTTATACAATGTACCATCAAGA
ACTGCATGTGATATTTTACCGGAAACAGTAGAGGTTCTATCGGCTCATAATAATATCATAGGTATCAAAGAAGCCGTTGATACCGAAGAAAGAATTGATG
ATTTAATTGCTATTTCATCTAATAACCAAAACTTTCAATTATTTTCAGGAGATGACCCTTCATTTATAAAGATGATTCAAAAAGGTGGCGATGGAGTAAT
TTCAGTCGCTGCGAATGTTGTACCAAGTAAAATATCTGAGATATGTAAACTTATAGAAGACAAAAAATATGACGAAGCTATTACCATTAATGACACCCTT
ACAAATTTATATGATCTATTATTTATTGAATCAAATCCAATACCAGTAAAATGGATGTTATTTAAAATGAACTTAATAAAAAATTCCATTAGGTTACCAC
TTGAAGAGCTTGATGAAATACATCAAGAAAATATTATAAATGAGATGTTAAAATTAAAAATAATATGAAACATTTATTTAATTTATTGCTATTAATATTT
TTTGTTGCTTCCTGTTCAATAATAGGAGGACCCAGTGGTTACTTTCCAGAAAAAAAATATGATTTTTTGGAAGAAGAAATTGAAGCTGACATAACTTTAC
CAAGTGACTTAGACTCTCCTGACACTGAGAACCACTATCCAGTAGGGGACCCATCAAACTTAGAAAACGTATTGGAAGTTCCTAAGCCAAGACAAATTTT
TTCTTCATCAGGTGATAGTTCTGTCCAACTTAGAAGACTAGGAGAGTTGATGTGGATATACATAGAAACTCTACCTTCTACTTCATGGCCGATATCAAAA
AATTATTGGGATACATCTGAATATGATGTTATTAAAGCTGATCCAGTTTCCGG
kiran
6 Jan 2010 20:33
Non evaluated contribution
LOCUS       tmpseq_0                 953 bp            linear       06-JAN-2010
DEFINITION  No definition line found.
ACCESSION   tmpseq_0
VERSION    
KEYWORDS    .
SOURCE      Unknown.
  ORGANISM  Unknown.
            Unclassified.
FEATURES             Location/Qualifiers
     source          1..953
BASE COUNT      363 a    148 c    149 g    293 t
ORIGIN      
        1 ttattacaac aaaccaactc aaaaaggact aataaatcat tacacaaaac ttgcaaatga
       61 ggtcgatata ccacaaattt tatacaatgt accatcaaga actgcatgtg atattttacc
      121 ggaaacagta gaggttctat cggctcataa taatatcata ggtatcaaag aagccgttga
      181 taccgaagaa agaattgatg atttaattgc tatttcatct aataaccaaa actttcaatt
      241 attttcagga gatgaccctt catttataaa gatgattcaa aaaggtggcg atggagtaat
      301 ttcagtcgct gcgaatgttg taccaagtaa aatatctgag atatgtaaac ttatagaaga
      361 caaaaaatat gacgaagcta ttaccattaa tgacaccctt acaaatttat atgatctatt
      421 atttattgaa tcaaatccaa taccagtaaa atggatgtta tttaaaatga acttaataaa
      481 aaattccatt aggttaccac ttgaagagct tgatgaaata catcaagaaa atattataaa
      541 tgagatgtta aaattaaaaa taatatgaaa catttattta atttattgct attaatattt
      601 tttgttgctt cctgttcaat aataggagga cccagtggtt actttccaga aaaaaaatat
      661 gattttttgg aagaagaaat tgaagctgac ataactttac caagtgactt agactctcct
      721 gacactgaga accactatcc agtaggggac ccatcaaact tagaaaacgt attggaagtt
      781 cctaagccaa gacaaatttt ttcttcatca ggtgatagtt ctgtccaact tagaagacta
      841 ggagagttga tgtggatata catagaaact ctaccttcta cttcatggcc gatatcaaaa
      901 aattattggg atacatctga atatgatgtt attaaagctg atccagtttc cgg
//